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SRX1625312: RNA-seq of Pandion haliaetus:liver tissue
1 ILLUMINA (Illumina HiSeq 2000) run: 32.9M spots, 1.7G bases, 1,015.1Mb downloads

Design: Illumina TruSeq polyA capture and fragmentation
Submitted by: United States Geological Survey
Study: Pandion haliaetus Transcriptome or Gene expression
show Abstracthide Abstract
The objective of this study is to identify the molecular pathways and gene expression patterns in livers of young birds that were exposed to methyl mercury in the egg. The main goal is to describe the mechanisms and strategies that underlay the differences in sensitivity to methylmercury observed among three species and to identify potential molecular indicators that can be used to predict avian responses to methylmercury. Eggs from osprey (Pandion haliaetus) were injected with a single dose of methyl mercury (MeHg) as MeHg chloride dissolved in corn oil (final concentration = 0.05, 0.1, 0.2, or 0.4 ug/g) to simulate maternal deposition of mercury into the egg. Liver was extracted and transcriptome profiles were examined on an Illumina HiSeq 2000.
Sample: Osprey exposed in ovo to 0.05 ppm MeHg in a study of mercury effects on birds
SAMN04525591 • SRS1334972 • All experiments • All runs
Library:
Name: Osp 0.05-6
Instrument: Illumina HiSeq 2000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: RANDOM PCR
Layout: SINGLE
Runs: 1 run, 32.9M spots, 1.7G bases, 1,015.1Mb
Run# of Spots# of BasesSizePublished
SRR321804632,931,2971.7G1,015.1Mb2016-03-16

ID:
2322040

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